| PMID | Year | Journal | Article |
|---|---|---|---|
| 37828014 | 2023 |
Nature communications |
Proteogenetic drug response profiling elucidates targetable vulnerabilities of myelofibrosis.2023, Nature communicationsMattheus H E Wildschut, Julien Mena, Cyril Dördelmann, Marc van Oostrum, Benjamin D Hale, Jens Settelmeier, Yasmin Festl, Veronika Lysenko, Patrick M Schürch, Alexander Ring, Yannik Severin, Michael S Bader, Patrick G A Pedrioli, Sandra Goetze, Audrey van Drogen, Stefan Balabanov, Radek C Skoda, Massimo Lopes, Bernd Wollscheid |
| 37609137 | 2023 |
bioRxiv : the preprint server for biology |
Epigenetic neural glioblastoma enhances synaptic integration and predicts therapeutic vulnerability.2023, bioRxiv : the preprint server for biologyRichard Drexler, Robin Khatri, Thomas Sauvigny, Malte Mohme, Cecile L Maire, Alice Ryba, Yahya Zghaibeh, Lasse Dührsen, Amanda Salviano-Silva, Katrin Lamszus, Manfred Westphal, Jens Gempt, Annika K Wefers, Julia Neumann, Helena Bode, Fabian Hausmann, Tobias B Huber, Stefan Bonn, Kerstin Jütten, Daniel Delev, Katharina J Weber, Patrick N Harter, Julia Onken, Peter Vajkoczy, David Capper, Benedikt Wiestler, Michael Weller, Berend Snijder, Alicia Buck, Tobias Weiss, Michael B Keough, Lijun Ni, Michelle Monje, Dana Silverbush, Volker Hovestadt, Mario L Suvà, Saritha Krishna, Shawn L Hervey-Jumper, Ulrich Schüller, Dieter H Heiland, Sonja Hänzelmann, Franz L Ricklefs Pubmed: 37609137 | bioRxiv : the preprint server for biology. 2023 Aug 07; : | 10.1101/2023.08.04.552017 |
| 37467314 | 2023 |
Science translational medicine |
Targeting the Siglec-sialic acid axis promotes antitumor immune responses in preclinical models of glioblastoma.2023, Science translational medicinePhilip Schmassmann, Julien Roux, Alicia Buck, Nazanin Tatari, Sabrina Hogan, Jinyu Wang, Natalia Rodrigues Mantuano, Ronja Wieboldt, Sohyon Lee, Berend Snijder, Deniz Kaymak, Tomás A Martins, Marie-Françoise Ritz, Tala Shekarian, Marta McDaid, Michael Weller, Tobias Weiss, Heinz Läubli, Gregor Hutter Pubmed: 37467314 | Science translational medicine. 2023 Jul 19; 15705: eadf5302 | 10.1126/scitranslmed.adf5302 |
| 37439341 | 2024 |
Haematologica |
Efficacy and feasibility of pharmacoscopy-guided treatment for acute myeloid leukemia patients who have exhausted all registered therapeutic options.2024, HaematologicaJonas Andreas Schmid |
| 37081258 | 2023 |
Nature cancer |
Ex vivo drug response heterogeneity reveals personalized therapeutic strategies for patients with multiple myeloma.2023, Nature cancerKlara Kropivsek |
| 36946761 | 2023 |
Cancer research |
ROS Induction Targets Persister Cancer Cells with Low Metabolic Activity in NRAS-Mutated Melanoma.2023, Cancer researchOssia M Eichhoff, Corinne I Stoffel, Jan Käsler, Luzia Briker, Patrick Turko, Gergely Karsai, Nina Zila, Verena Paulitschke, Phil F Cheng, Alexander Leitner, Andrea Bileck, Nicola Zamboni, Anja Irmisch, Zsolt Balazs, Aizhan Tastanova, Susana Pascoal, Pål Johansen, Rebekka Wegmann, Julien Mena, Alaa Othman, Vasanthi S Viswanathan, Judith Wenzina, Andrea Aloia, Annalisa Saltari, Andreas Dzung, , Michael Krauthammer, Stuart L Schreiber, Thorsten Hornemann, Martin Distel, Berend Snijder, Reinhard Dummer, Mitchell P Levesque Pubmed: 36946761 | Cancer research. 2023 Apr 04; 837: 1128-1146 | 10.1158/0008-5472.CAN-22-1826 |
| 36322666 | 2022 |
Science advances |
Multiplexed high-throughput immune cell imaging reveals molecular health-associated phenotypes.2022, Science advancesYannik Severin, Benjamin D Hale, Julien Mena, David Goslings, Beat M Frey, Berend Snijder |
| 36321552 | 2022 |
Molecular systems biology |
A functional analysis of 180 cancer cell lines reveals conserved intrinsic metabolic programs.2022, Molecular systems biologySarah Cherkaoui, Stephan Durot, Jenna Bradley, Susan Critchlow, Sebastien Dubuis, Mauro Miguel Masiero, Rebekka Wegmann, Berend Snijder, Alaa Othman, Claus Bendtsen, Nicola Zamboni Pubmed: 36321552 | Molecular systems biology. 2022 Nov ; 1811: e11033 | 10.15252/msb.202211033 |
| 36125297 | 2022 |
Blood cancer discovery |
Deep Morphology Learning Enhances Ex Vivo Drug Profiling-Based Precision Medicine.2022, Blood cancer discoveryTim Heinemann |
| 36037304 | 2022 |
Clinical cancer research : an official journal of the American Association for Cancer Research |
Multifunctional mRNA-Based CAR T Cells Display Promising Antitumor Activity Against Glioblastoma.2022, Clinical cancer research : an official journal of the American Association for Cancer ResearchHanna Meister, Thomas Look, Patrick Roth, Steve Pascolo, Ugur Sahin, Sohyon Lee, Benjamin D Hale, Berend Snijder, Luca Regli, Vidhya M Ravi, Dieter Henrik Heiland, Charles L Sentman, Michael Weller, Tobias Weiss Pubmed: 36037304 | Clinical cancer research : an official journal of the American Association for Cancer Research. 2022 Nov 01; 2821: 4747-4756 | 10.1158/1078-0432.CCR-21-4384 |
| 35922511 | 2022 |
Nature |
A physical wiring diagram for the human immune system.2022, NatureJarrod Shilts, Yannik Severin, Francis Galaway, Nicole Müller-Sienerth, Zheng-Shan Chong, Sophie Pritchard, Sarah Teichmann, Roser Vento-Tormo, Berend Snijder, Gavin J Wright |
| 34857745 | 2021 |
Nature communications |
Light-mediated discovery of surfaceome nanoscale organization and intercellular receptor interaction networks.2021, Nature communicationsMaik Müller, Fabienne Gräbnitz, Niculò Barandun, Yang Shen, Fabian Wendt, Sebastian N Steiner, Yannik Severin, Stefan U Vetterli, Milon Mondal, James R Prudent, Raphael Hofmann, Marc van Oostrum, Roman C Sarott, Alexey I Nesvizhskii, Erick M Carreira, Jeffrey W Bode, Berend Snijder, John A Robinson, Martin J Loessner, Annette Oxenius, Bernd Wollscheid Pubmed: 34857745 | Nature communications. 2021 Dec 02; 121: 7036 | 10.1038/s41467-021-27280-x |
| 34635570 | 2022 |
Cancer discovery |
Functional Precision Medicine Provides Clinical Benefit in Advanced Aggressive Hematologic Cancers and Identifies Exceptional Responders.2022, Cancer discoveryChristoph Kornauth |
| 34079902 | 2021 |
ACS central science |
Allosteric Antagonist Modulation of TRPV2 by Piperlongumine Impairs Glioblastoma Progression.2021, ACS central scienceJoão Conde, Ruth A Pumroy, Charlotte Baker, Tiago Rodrigues, Ana Guerreiro, Bárbara B Sousa, Marta C Marques, Bernardo P de Almeida, Sohyon Lee, Elvira P Leites, Daniel Picard, Amrita Samanta, Sandra H Vaz, Florian Sieglitz, Maike Langini, Marc Remke, Rafael Roque, Tobias Weiss, Michael Weller, Yuhang Liu, Seungil Han, Francisco Corzana, Vanessa A Morais, Cláudia C Faria, Tânia Carvalho, Panagis Filippakopoulos, Berend Snijder, Nuno L Barbosa-Morais, Vera Y Moiseenkova-Bell, Gonçalo J L Bernardes Pubmed: 34079902 | ACS central science. 2021 May 26; 75: 868-881 | 10.1021/acscentsci.1c00070 |
| 33627323 | 2021 |
Diabetes |
Beneficial Metabolic Effects of TREM2 in Obesity Are Uncoupled From Its Expression on Macrophages.2021, DiabetesOmar Sharif, Julia Stefanie Brunner, Ana Korosec, Rui Martins, Alexander Jais, Berend Snijder, Andrea Vogel, Michael Caldera, Anastasiya Hladik, Karin Lakovits, Simona Saluzzo, Benedikta Boehm, Anna-Dorothea Gorki, Ildiko Mesteri, Josefine Lindroos-Christensen, Katharina Tillmann, Dagmar Stoiber, Jörg Menche, Gernot Schabbauer, Martin Bilban, Giulio Superti-Furga, Harald Esterbauer, Sylvia Knapp Pubmed: 33627323 | Diabetes. 2021 Sep ; 709: 2042-2057 | 10.2337/db20-0572 |
| 33482122 | 2021 |
Cancer cell |
The Tumor Profiler Study: integrated, multi-omic, functional tumor profiling for clinical decision support.2021, Cancer cellAnja Irmisch |
| 32707033 | 2020 |
Molecular cell |
Kinase Interaction Network Expands Functional and Disease Roles of Human Kinases.2020, Molecular cellMarija Buljan, Rodolfo Ciuffa, Audrey van Drogen, Anton Vichalkovski, Martin Mehnert, George Rosenberger, Sohyon Lee, Markku Varjosalo, Lucia Espona Pernas, Vincent Spegg, Berend Snijder, Ruedi Aebersold, Matthias Gstaiger Pubmed: 32707033 | Molecular cell. 2020 Aug 06; 793: 504-520.e9 | 10.1016/j.molcel.2020.07.001 |
| 31636628 | 2019 |
Frontiers in immunology |
Common Nodes of Virus-Host Interaction Revealed Through an Integrated Network Analysis.2019, Frontiers in immunologyKorbinian Bösl, Aleksandr Ianevski, Thoa T Than, Petter I Andersen, Suvi Kuivanen, Mona Teppor, Eva Zusinaite, Uga Dumpis, Astra Vitkauskiene, Rebecca J Cox, Hannimari Kallio-Kokko, Anders Bergqvist, Tanel Tenson, Andres Merits, Valentyn Oksenych, Magnar Bjørås, Marit W Anthonsen, David Shum, Mari Kaarbø, Olli Vapalahti, Marc P Windisch, Giulio Superti-Furga, Berend Snijder, Denis Kainov, Richard K Kandasamy Pubmed: 31636628 | Frontiers in immunology. 2019 ; 10: 2186 | 10.3389/fimmu.2019.02186 |
| 30692684 | 2019 |
Nature chemical biology |
Combined chemosensitivity and chromatin profiling prioritizes drug combinations in CLL.2019, Nature chemical biologyChristian Schmidl, Gregory I Vladimer, André F Rendeiro, Susanne Schnabl, Thomas Krausgruber, Christina Taubert, Nikolaus Krall, Tea Pemovska, Mohammad Araghi, Berend Snijder, Rainer Hubmann, Anna Ringler, Kathrin Runggatscher, Dita Demirtas, Oscar Lopez de la Fuente, Martin Hilgarth, Cathrin Skrabs, Edit Porpaczy, Michaela Gruber, Gregor Hoermann, Stefan Kubicek, Philipp B Staber, Medhat Shehata, Giulio Superti-Furga, Ulrich Jäger, Christoph Bock Pubmed: 30692684 | Nature chemical biology. 2019 Mar ; 153: 232-240 | 10.1038/s41589-018-0205-2 |
| 30658968 | 2019 |
Science immunology |
Human "TH9" cells are a subpopulation of PPAR-γ+ TH2 cells.2019, Science immunologyClaire Micossé, Leonhard von Meyenn, Oliver Steck, Enja Kipfer, Christian Adam, Cedric Simillion, S Morteza Seyed Jafari, Peter Olah, Nikhil Yawlkar, Dagmar Simon, Luca Borradori, Stefan Kuchen, Daniel Yerly, Bernhard Homey, Curdin Conrad, Berend Snijder, Marc Schmidt, Christoph Schlapbach Pubmed: 30658968 | Science immunology. 2019 Jan 18; 431: | 10.1126/sciimmunol.aat5943 |
| 29982719 | 2018 |
Protein engineering, design & selection : PEDS |
A novel dual-cytokine-antibody fusion protein for the treatment of CD38-positive malignancies.2018, Protein engineering, design & selection : PEDSRoberto De Luca, Paul Kachel, Klara Kropivsek, Berend Snijder, Markus G Manz, Dario Neri Pubmed: 29982719 | Protein engineering, design & selection : PEDS. 2018 May 01; 315: 173-179 | 10.1093/protein/gzy015 |
| 29153976 | 2017 |
The Lancet. Haematology |
Image-based ex-vivo drug screening for patients with aggressive haematological malignancies: interim results from a single-arm, open-label, pilot study.2017, The Lancet. HaematologyBerend Snijder |
| 28725479 | 2016 |
NPJ systems biology and applications |
A time-resolved molecular map of the macrophage response to VSV infection.2016, NPJ systems biology and applicationsRichard K Kandasamy, Gregory I Vladimer, Berend Snijder, André C Müller, Manuele Rebsamen, Johannes W Bigenzahn, Anna Moskovskich, Monika Sabler, Adrijana Stefanovic, Stefania Scorzoni, Manuela Brückner, Thomas Penz, Ciara Cleary, Robert Kralovics, Jacques Colinge, Keiryn L Bennett, Giulio Superti-Furga Pubmed: 28725479 | NPJ systems biology and applications. 2016 ; 2: 16027 | 10.1038/npjsba.2016.27 |
| 28437395 | 2017 |
Nature chemical biology |
Global survey of the immunomodulatory potential of common drugs.2017, Nature chemical biologyGregory I Vladimer |
| 26232220 | 2015 |
Cell |
A Call for Systematic Research on Solute Carriers.2015, CellAdrián César-Razquin |
| 26095358 | 2015 |
Cell reports |
The Lipid-Modifying Enzyme SMPDL3B Negatively Regulates Innate Immunity.2015, Cell reportsLeonhard X Heinz, Christoph L Baumann, Marielle S Köberlin, Berend Snijder, Riem Gawish, Guanghou Shui, Omar Sharif, Irene M Aspalter, André C Müller, Richard K Kandasamy, Florian P Breitwieser, Andreas Pichlmair, Manuela Bruckner, Manuele Rebsamen, Stephan Blüml, Thomas Karonitsch, Astrid Fauster, Jacques Colinge, Keiryn L Bennett, Sylvia Knapp, Markus R Wenk, Giulio Superti-Furga Pubmed: 26095358 | Cell reports. 2015 Jun 30; 1112: 1919-28 | 10.1016/j.celrep.2015.05.006 |
| 26095250 | 2015 |
Cell |
A Conserved Circular Network of Coregulated Lipids Modulates Innate Immune Responses.2015, CellMarielle S Köberlin |
| 25965523 | 2015 |
ACS chemical biology |
Human Haploid Cell Genetics Reveals Roles for Lipid Metabolism Genes in Nonapoptotic Cell Death.2015, ACS chemical biologyScott J Dixon, Georg E Winter, Leila S Musavi, Eric D Lee, Berend Snijder, Manuele Rebsamen, Giulio Superti-Furga, Brent R Stockwell Pubmed: 25965523 | ACS chemical biology. 2015 Jul 17; 107: 1604-9 | 10.1021/acschembio.5b00245 |
| 25860612 | 2015 |
Cell |
KPC1-mediated ubiquitination and proteasomal processing of NF-κB1 p105 to p50 restricts tumor growth.2015, CellYelena Kravtsova-Ivantsiv, Inna Shomer, Victoria Cohen-Kaplan, Berend Snijder, Giulio Superti-Furga, Hedva Gonen, Thomas Sommer, Tamar Ziv, Arie Admon, Inna Naroditsky, Muhammad Jbara, Ashraf Brik, Eli Pikarsky, Yong Tae Kwon, Ilana Doweck, Aaron Ciechanover Pubmed: 25860612 | Cell. 2015 Apr 09; 1612: 333-47 | 10.1016/j.cell.2015.03.001 |
| 25851648 | 2015 |
EMBO reports |
Wnt directs the endosomal flux of LDL-derived cholesterol and lipid droplet homeostasis.2015, EMBO reportsCameron C Scott, Stefania Vossio, Fabrizio Vacca, Berend Snijder, Jorge Larios, Olivier Schaad, Nicolas Guex, Dmitry Kuznetsov, Olivier Martin, Marc Chambon, Gerardo Turcatti, Lucas Pelkmans, Jean Gruenberg Pubmed: 25851648 | EMBO reports. 2015 Jun ; 166: 741-52 | 10.15252/embr.201540081 |
| 25561175 | 2015 |
Nature |
SLC38A9 is a component of the lysosomal amino acid sensing machinery that controls mTORC1.2015, NatureManuele Rebsamen, Lorena Pochini, Taras Stasyk, Mariana E G de Araújo, Michele Galluccio, Richard K Kandasamy, Berend Snijder, Astrid Fauster, Elena L Rudashevskaya, Manuela Bruckner, Stefania Scorzoni, Przemyslaw A Filipek, Kilian V M Huber, Johannes W Bigenzahn, Leonhard X Heinz, Claudine Kraft, Keiryn L Bennett, Cesare Indiveri, Lukas A Huber, Giulio Superti-Furga Pubmed: 25561175 | Nature. 2015 Mar 26; 5197544: 477-81 | 10.1038/nature14107 |
| 25534632 | 2014 |
BMC genomics |
Simultaneous analysis of large-scale RNAi screens for pathogen entry.2014, BMC genomicsPauli Rämö, Anna Drewek, Cécile Arrieumerlou, Niko Beerenwinkel, Houchaima Ben-Tekaya, Bettina Cardel, Alain Casanova, Raquel Conde-Alvarez, Pascale Cossart, Gábor Csúcs, Simone Eicher, Mario Emmenlauer, Urs Greber, Wolf-Dietrich Hardt, Ari Helenius, Christoph Kasper, Andreas Kaufmann, Saskia Kreibich, Andreas Kühbacher, Peter Kunszt, Shyan Huey Low, Jason Mercer, Daria Mudrak, Simone Muntwiler, Lucas Pelkmans, Javier Pizarro-Cerdá, Michael Podvinec, Eva Pujadas, Bernd Rinn, Vincent Rouilly, Fabian Schmich, Juliane Siebourg-Polster, Berend Snijder, Michael Stebler, Gabriel Studer, Ewa Szczurek, Matthias Truttmann, Christian von Mering, Andreas Vonderheit, Artur Yakimovich, Peter Bühlmann, Christoph Dehio Pubmed: 25534632 | BMC genomics. 2014 Dec 22; 151: 1162 | 10.1186/1471-2164-15-1162 |
| 25446316 | 2015 |
Nature reviews. Genetics |
Single-cell and multivariate approaches in genetic perturbation screens.2015, Nature reviews. GeneticsPrisca Liberali, Berend Snijder, Lucas Pelkmans Pubmed: 25446316 | Nature reviews. Genetics. 2015 Jan ; 161: 18-32 | 10.1038/nrg3768 |
| 25101748 | 2014 |
Nature biotechnology |
Toward effective sharing of high-dimensional immunology data.2014, Nature biotechnologyBerend Snijder |
| 24906158 | 2014 |
Cell |
A hierarchical map of regulatory genetic interactions in membrane trafficking.2014, CellPrisca Liberali, Berend Snijder, Lucas Pelkmans |
| 24874089 | 2014 |
PLoS pathogens |
Large scale RNAi reveals the requirement of nuclear envelope breakdown for nuclear import of human papillomaviruses.2014, PLoS pathogensInci Aydin, Susanne Weber, Berend Snijder, Pilar Samperio Ventayol, Andreas Kühbacher, Miriam Becker, Patricia M Day, John T Schiller, Michael Kann, Lucas Pelkmans, Ari Helenius, Mario Schelhaas Pubmed: 24874089 | PLoS pathogens. 2014 May ; 105: e1004162 | 10.1371/journal.ppat.1004162 |
| 24097268 | 2013 |
Nature methods |
Predicting functional gene interactions with the hierarchical interaction score.2013, Nature methodsBerend Snijder |
| 23084750 | 2012 |
Cell reports |
RNAi screening reveals proteasome- and Cullin3-dependent stages in vaccinia virus infection.2012, Cell reportsJason Mercer |
| 22531119 | 2012 |
Molecular systems biology |
Single-cell analysis of population context advances RNAi screening at multiple levels.2012, Molecular systems biologyBerend Snijder, Raphael Sacher, Pauli Rämö, Prisca Liberali, Karin Mench, Nina Wolfrum, Laura Burleigh, Cameron C Scott, Monique H Verheije, Jason Mercer, Stefan Moese, Thomas Heger, Kristina Theusner, Andreas Jurgeit, David Lamparter, Giuseppe Balistreri, Mario Schelhaas, Cornelis A M De Haan, Varpu Marjomäki, Timo Hyypiä, Peter J M Rottier, Beate Sodeik, Mark Marsh, Jean Gruenberg, Ali Amara, Urs Greber, Ari Helenius, Lucas Pelkmans |
| 21407211 | 2011 |
Molecular systems biology |
RNAi screen of Salmonella invasion shows role of COPI in membrane targeting of cholesterol and Cdc42.2011, Molecular systems biologyBenjamin Misselwitz, Sabrina Dilling, Pascale Vonaesch, Raphael Sacher, Berend Snijder, Markus Schlumberger, Samuel Rout, Manuel Stark, Christian von Mering, Lucas Pelkmans, Wolf-Dietrich Hardt Pubmed: 21407211 | Molecular systems biology. 2011 Mar 15; 7: 474 | 10.1038/msb.2011.7 |
| 21224886 | 2011 |
Nature reviews. Molecular cell biology |
Origins of regulated cell-to-cell variability.2011, Nature reviews. Molecular cell biologyBerend Snijder, Lucas Pelkmans Pubmed: 21224886 | Nature reviews. Molecular cell biology. 2011 Feb ; 122: 119-25 | 10.1038/nrm3044 |
| 19729371 | 2009 |
Bioinformatics (Oxford, England) |
CellClassifier: supervised learning of cellular phenotypes.2009, Bioinformatics (Oxford, England)Pauli Rämö, Raphael Sacher, Berend Snijder, Boris Begemann, Lucas Pelkmans Pubmed: 19729371 | Bioinformatics (Oxford, England). 2009 Nov 15; 2522: 3028-30 | 10.1093/bioinformatics/btp524 |
| 19710653 | 2009 |
Nature |
Population context determines cell-to-cell variability in endocytosis and virus infection.2009, NatureBerend Snijder, Raphael Sacher, Pauli Rämö, Eva-Maria Damm, Prisca Liberali, Lucas Pelkmans |
| 16244868 | 2005 |
Planta |
The Arabidopsis LHP1 protein is a component of euchromatin.2005, PlantaMarc Libault, Federico Tessadori, Sophie Germann, Berend Snijder, Paul Fransz, Valérie Gaudin Pubmed: 16244868 | Planta. 2005 Nov ; 2225: 910-25 | 10.1007/s00425-005-0129-4 |